MS metabolomics paired child samples compound metadata
Table ID: BiB_Metabolomics.metms_pairc_c
Entity type | Variables | Entities | Updated |
---|---|---|---|
Compound | 19 | 1168 | 2022-09-30 |
Meta data about compounds (markers) from mass spectrometry metabolomics (Metabolon) on paired child samples.
variable | value_type | summary |
---|---|---|
VariableNameRaw | text | 1168 unique values 1168 non-missing values 8 to 11 characters |
VariableNameScaled | text | 1168 unique values 1168 non-missing values 8 to 11 characters |
chem_id | decimal | mean (sd) 260519792.50 (367045555.45) min < median < max 35.00 < 100004470.50 < 999925828.00 Complete: 1168 (100.00%) |
lib_id | decimal | mean (sd) 287.11 (91.46) min < median < max 209.00 < 209.00 < 402.00 Complete: 1168 (100.00%) |
chro_lib_entry_id | decimal | mean (sd) 165800.20 (32282.48) min < median < max 123153.00 < 155996.50 < 240094.00 Complete: 1168 (100.00%) |
super_pathway | decimal | 1 : Amino Acid 2 : Carbohydrate 3 : Cofactors and Vitamins 4 : Energy 5 : Lipid 6 : Nucleotide 7 : Partially Characterized Molecules 8 : Peptide 9 : Xenobiotics Complete: 939 (80.39%) |
sub_pathway | decimal | 1 : Acetylated Peptides 10 : Ceramide PEs 100 : Short Chain Fatty Acid 101 : Sphingolipid Synthesis 102 : Sphingomyelins 103 : Sphingosines 104 : Sterol 105 : TCA Cycle 106 : Tobacco Metabolite 107 : Tocopherol Metabolism 108 : Tryptophan Metabolism 109 : Tyrosine Metabolism 11 : Ceramides 110 : Urea cycle; Arginine and Proline Metabolism 111 : Vitamin A Metabolism 112 : Vitamin B6 Metabolism 113 : Xanthine Metabolism 12 : Chemical 13 : Corticosteroids 14 : Creatine Metabolism 15 : Diacylglycerol 16 : Dihydroceramides 17 : Dihydrosphingomyelins 18 : Dipeptide 19 : Disaccharides and Oligosaccharides 2 : Advanced Glycation End-product 20 : Drug - Analgesics, Anesthetics 21 : Drug - Antibiotic 22 : Drug - Cardiovascular 23 : Drug - Gastrointestinal 24 : Drug - Neurological 25 : Drug - Other 26 : Drug - Psychoactive 27 : Drug - Topical Agents 28 : Endocannabinoid 29 : Estrogenic Steroids 3 : Alanine and Aspartate Metabolism 30 : Fatty Acid Metabolism (Acyl Carnitine, Dicarboxylate) 31 : Fatty Acid Metabolism (Acyl Carnitine, Hydroxy) 32 : Fatty Acid Metabolism (Acyl Carnitine, Long Chain Saturated) 33 : Fatty Acid Metabolism (Acyl Carnitine, Medium Chain) 34 : Fatty Acid Metabolism (Acyl Carnitine, Monounsaturated) 35 : Fatty Acid Metabolism (Acyl Carnitine, Polyunsaturated) 36 : Fatty Acid Metabolism (Acyl Carnitine, Short Chain) 37 : Fatty Acid Metabolism (Acyl Choline) 38 : Fatty Acid Metabolism (Acyl Glutamine) 39 : Fatty Acid Metabolism (Acyl Glycine) 4 : Aminosugar Metabolism 40 : Fatty Acid Metabolism (also BCAA Metabolism) 41 : Fatty Acid, Amide 42 : Fatty Acid, Amino 43 : Fatty Acid, Branched 44 : Fatty Acid, Dicarboxylate 45 : Fatty Acid, Dihydroxy 46 : Fatty Acid, Monohydroxy 47 : Fibrinogen Cleavage Peptide 48 : Food Component/Plant 49 : Fructose, Mannose and Galactose Metabolism 5 : Androgenic Steroids 50 : Gamma-glutamyl Amino Acid 51 : Glutamate Metabolism 52 : Glutathione Metabolism 53 : Glycerolipid Metabolism 54 : Glycine, Serine and Threonine Metabolism 55 : Glycolysis, Gluconeogenesis, and Pyruvate Metabolism 56 : Guanidino and Acetamido Metabolism 57 : Hemoglobin and Porphyrin Metabolism 58 : Hexosylceramides (HCER) 59 : Histidine Metabolism 6 : Ascorbate and Aldarate Metabolism 60 : Inositol Metabolism 61 : Ketone Bodies 62 : Lactosylceramides (LCER) 63 : Leucine, Isoleucine and Valine Metabolism 64 : Long Chain Monounsaturated Fatty Acid 65 : Long Chain Polyunsaturated Fatty Acid (n3 and n6) 66 : Long Chain Saturated Fatty Acid 67 : Lysine Metabolism 68 : Lysophospholipid 69 : Lysoplasmalogen 7 : Bacterial/Fungal 70 : Medium Chain Fatty Acid 71 : Methionine, Cysteine, SAM and Taurine Metabolism 72 : Mevalonate Metabolism 73 : Monoacylglycerol 74 : Nicotinate and Nicotinamide Metabolism 75 : Oxidative Phosphorylation 76 : Pantothenate and CoA Metabolism 77 : Partially Characterized Molecules 78 : Pentose Metabolism 79 : Phenylalanine Metabolism 8 : Benzoate Metabolism 80 : Phosphatidylcholine (PC) 81 : Phosphatidylethanolamine (PE) 82 : Phosphatidylinositol (PI) 83 : Phosphatidylserine (PS) 84 : Phospholipid Metabolism 85 : Plasmalogen 86 : Polyamine Metabolism 87 : Polypeptide 88 : Pregnenolone Steroids 89 : Primary Bile Acid Metabolism 9 : Carnitine Metabolism 90 : Progestin Steroids 91 : Purine Metabolism, (Hypo)Xanthine/Inosine containing 92 : Purine Metabolism, Adenine containing 93 : Purine Metabolism, Guanine containing 94 : Pyrimidine Metabolism, Cytidine containing 95 : Pyrimidine Metabolism, Orotate containing 96 : Pyrimidine Metabolism, Thymine containing 97 : Pyrimidine Metabolism, Uracil containing 98 : Riboflavin Metabolism 99 : Secondary Bile Acid Metabolism Complete: 939 (80.39%) |
pathway_sortorder | decimal | mean (sd) 2683.89 (1845.38) min < median < max 1.00 < 2612.00 < 6453.00 Complete: 939 (80.39%) |
type | text | 2 unique values 1168 non-missing values 5 to 7 characters |
inchikey | text | 638 unique values 646 non-missing values 4 to 27 characters |
smiles | text | 908 unique values 915 non-missing values 7 to 211 characters |
chemical_name | text | 1168 unique values 1168 non-missing values 4 to 67 characters |
plot_name | text | 1168 unique values 1168 non-missing values 3 to 67 characters |
cas | text | 592 unique values 593 non-missing values 6 to 28 characters |
chemspider | text | 668 unique values 669 non-missing values 2 to 12 characters |
hmdb | text | 725 unique values 736 non-missing values 9 to 47 characters |
kegg | text | 376 unique values 387 non-missing values 5 to 27 characters |
pubchem | text | 750 unique values 756 non-missing values 2 to 34 characters |
platform | decimal | 1 : Neg 2 : Polar 3 : Pos Early 4 : Pos Late Complete: 1168 (100.00%) |